SpliCQAnalyzing alternative splicing events and isoforms in next generation sequencing data |
SpliCQAnalyzing alternative splicing events and isoforms in next generation sequencing data |
SpliCq is a Java library to analyze next generation sequencing data (e.g. data generated by Illumina's mRNAseq method) and especially to detect alternative splicing events and major isoforms. The software is written in Java and will run on any system where Java is available. Documentation and example files are packed within the distribution zip file.